MOMD:
Mouse Oral Microbiome Database
Home
Taxonomy
Genomics
Tools
16S rRNA Gene Idnetification
BLAST Search Genomes
Download
Publication
MOMD Genome Explorer
Selected genome:
Pasteurella sp.
19428wF3_WM03
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
Genome Viewer
PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
Quick search
:
Match all words
Match any words
Match exact phrase
Partially
In whole field
(leave empty to show all)
PROKKA Genome Annotation:
contigs: 32
bases: 2,266,646 bps
CDS: 2,120
rRNA: 7
Repeat region:
tmRNA: 1
tRNA: 52
misc RNA:
Total features: 2,180
Total number of protein coding genes annotated/found:
2,120
Display
20
50
100
All items per page
Items 1 - 20
🡆
click arrow to navigate by page or
of 107 pages
Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5022|JADGKV010000009.1
SEQF5022_02180
Genome Viewer
NA
AA
531/177
93433-93963
Protoporphyrinogen IX dehydrogenase [menaquinone]
SEQF5022|JADGKV010000009.1
SEQF5022_02179
Genome Viewer
NA
AA
1464/488
91970-93433
Trk system potassium uptake protein TrkH
SEQF5022|JADGKV010000009.1
SEQF5022_02178
Genome Viewer
NA
AA
621/207
91347-91967
IMPACT family member YigZ
SEQF5022|JADGKV010000009.1
SEQF5022_02177
Genome Viewer
NA
AA
240/80
91235-90996
Sulfur carrier protein TusA
SEQF5022|JADGKV010000009.1
SEQF5022_02176
Genome Viewer
NA
AA
897/299
90063-90959
hypothetical protein
SEQF5022|JADGKV010000009.1
SEQF5022_02175
Genome Viewer
NA
AA
1866/622
88188-90053
Selenocysteine-specific elongation factor
SEQF5022|JADGKV010000009.1
SEQF5022_02174
Genome Viewer
NA
AA
1386/462
86806-88191
L-seryl-tRNA(Sec) selenium transferase
SEQF5022|JADGKV010000009.1
SEQF5022_02172
Genome Viewer
NA
AA
261/87
86511-86251
oxaloacetate decarboxylase gamma chain
SEQF5022|JADGKV010000009.1
SEQF5022_02171
Genome Viewer
NA
AA
1827/609
86215-84389
Oxaloacetate decarboxylase alpha chain
SEQF5022|JADGKV010000009.1
SEQF5022_02170
Genome Viewer
NA
AA
1302/434
84372-83071
Oxaloacetate decarboxylase beta chain
SEQF5022|JADGKV010000009.1
SEQF5022_02169
Genome Viewer
NA
AA
564/188
82430-82993
Succinate-acetate/proton symporter SatP
SEQF5022|JADGKV010000009.1
SEQF5022_02168
Genome Viewer
NA
AA
2625/875
82217-79593
Aldehyde-alcohol dehydrogenase
SEQF5022|JADGKV010000009.1
SEQF5022_02167
Genome Viewer
NA
AA
387/129
79472-79086
hypothetical protein
SEQF5022|JADGKV010000009.1
SEQF5022_02166
Genome Viewer
NA
AA
318/106
78711-79028
Guanidinium exporter
SEQF5022|JADGKV010000009.1
SEQF5022_02165
Genome Viewer
NA
AA
393/131
78248-78640
HTH-type transcriptional regulator ZntR
SEQF5022|JADGKV010000009.1
SEQF5022_02164
Genome Viewer
NA
AA
651/217
77547-78197
Cadmium%2C cobalt and zinc/H(+)-K(+) antiporter
SEQF5022|JADGKV010000009.1
SEQF5022_02163
Genome Viewer
NA
AA
1281/427
75973-77253
Anaerobic glycerol-3-phosphate dehydrogenase subunit C
SEQF5022|JADGKV010000009.1
SEQF5022_02162
Genome Viewer
NA
AA
1284/428
74680-75963
Anaerobic glycerol-3-phosphate dehydrogenase subunit B
SEQF5022|JADGKV010000009.1
SEQF5022_02161
Genome Viewer
NA
AA
1692/564
72999-74690
Anaerobic glycerol-3-phosphate dehydrogenase subunit A
SEQF5022|JADGKV010000009.1
SEQF5022_02160
Genome Viewer
NA
AA
1443/481
72716-71274
Glycerol-3-phosphate transporter
Items 1 - 20
🡆
click arrow to navigate by page or
of 107 pages
Genome Viewer
JBrowse Genome Viewer
* Click GI, UID, Gene Product to go to NCBI record
^ Click column names to toggle sorting
Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
Powered by
